Parental gene:

RPL22, ENSGGOG00000027739

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:1:6327887..6342666(-)


>ENSGGOG00000027739
ATGGCTCCTGTGAAAAAGCTTGTGGTGAAGGGGGGCAAAAAAAAGAAGCAAGTTCTGAAGTTCACTCTTGATTGCACCCA
CCCTGTAGAAGATGGAATCATGGATGCTGCCAATTTTGAGCAGTTTTTGCAAGAAAGGATCAAAGTGAACGGAAAAGCTG
GGAACCTTGGTGGAGGGGTGGTGACCATCGAAAGGAGCAAGAGCAAGATCACCGTGACATCCGAGGTGCCTTTCTCCAAA
AGGTATTTGAAATATCTCACCAAAAAATATTTGAAGAAGAATAATCTACGTGACTGGTTGCGCGTAGTTGCTAACAGCAA
AGAGAGTTACGAATTACGTTACTTCCAGATTAACCAGGACGAAGAAGAGGAGGAAGACGAGGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 164 .77 RPM
SRP007412_cerebellum 187 .18 RPM
SRP007412_heart 89 .68 RPM
SRP007412_kidney 348 .25 RPM
SRP007412_liver 216 .43 RPM
SRP007412_testis 211 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009864 possible_ortholog 7 retrogenes
Bos taurus ENSBTAG00000014423 possible_ortholog 4 retrogenes
Choloepus hoffmanni ENSCHOG00000007477 possible_ortholog 2 retrogenes
Callithrix jacchus ENSCJAG00000000132 possible_ortholog 12 retrogenes
Cavia porcellus ENSCPOG00000020139 ortholog_one2many 2 retrogenes
Dasypus novemcinctus ENSDNOG00000013166 possible_ortholog 8 retrogenes
Felis catus ENSFCAG00000006320 possible_ortholog 3 retrogenes
Homo sapiens ENSG00000116251 possible_ortholog 16 retrogenes
Gorilla gorilla ENSGGOG00000001734 within_species_paralog 1 retrogene
Loxodonta africana ENSLAFG00000006352 possible_ortholog 5 retrogenes
Macropus eugenii ENSMEUG00000008801 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000018347 ortholog_one2one 12 retrogenes
Monodelphis domestica ENSMODG00000006225 possible_ortholog 1 retrogene
Mustela putorius furo ENSMPUG00000007087 possible_ortholog 6 retrogenes
Mus musculus ENSMUSG00000028936 possible_ortholog 5 retrogenes
Nomascus leucogenys ENSNLEG00000010337 possible_ortholog 10 retrogenes
Otolemur garnettii ENSOGAG00000014776 possible_ortholog 7 retrogenes
Pongo abelii ENSPPYG00000001951 possible_ortholog 11 retrogenes
Pan troglodytes ENSPTRG00000000076 possible_ortholog 14 retrogenes
Rattus norvegicus ENSRNOG00000011104 possible_ortholog 5 retrogenes
Sarcophilus harrisii ENSSHAG00000018731 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000003367 possible_ortholog 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000002832 ortholog_one2many 4 retrogenes
Tupaia belangeri ENSTBEG00000009172 possible_ortholog 33 retrogenes
Tarsius syrichta ENSTSYG00000003649 ortholog_one2many 32 retrogenes
Tursiops truncatus ENSTTRG00000010488 possible_ortholog 8 retrogenes
Vicugna pacos ENSVPAG00000009466 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_37 84.25 99.22
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2. retro_ggor_531 77.78 97.66
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3. retro_ggor_613 80.80 95.31
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4. retro_ggor_1111 90.32 96.88
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5. retro_ggor_1652 85.71 97.66
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6. retro_ggor_1655 91.30 89.84
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7. retro_ggor_1708 91.07 87.50
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8. retro_ggor_1757 77.88 85.94
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9. retro_ggor_2268 70.27 86.72
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10. retro_ggor_2567 93.55 71.88
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Download FASTA sequences of all ENSGGOG00000027739 retrocopies