Parental gene:

RPL22, ENSAMEG00000009864

Aliases:None
Description:ribosomal protein L22 [Source:HGNC Symbol;Acc:10315]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193077.1:840412..846353(+)


>ENSAMEG00000009864
CCCGTTGTGGTTTTCAAGAAGAAAAAGCTTGTGGCCAAGGGGGGCAAAAAAAAGAAGCAAGTCCTGAAGTTTACCCTTGA
TTGCACCCACCCTGTAGAAGATGGAATCATGGATGCTGCCAATTTTGAGCAGTTTCTTCAGGAGAGAATCAAAGTGAATG
GAAAAGCTGGGAATCTCGGTGGAGGGGTTGTAACAATTGAAAGGAGCAAAAGCAAGATCACTGTAACTTCTGAGGTGCCT
TTTTCCAAAAGGTATTTGAAATATCTCACCAAGAAGTATCTGAAGAAGAACAACCTGCGTGACTGGCTGCGCGTAGTCGC
CAACAGCAAGGACAGCTACGAGCTGCGTTACTTCCAGATTAACCAGGACGAGGAAGAGGAGGAGGATGAGGATTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004730 within_species_paralog 1 retrogene
Bos taurus ENSBTAG00000014423 ortholog_one2one 4 retrogenes
Choloepus hoffmanni ENSCHOG00000007477 ortholog_one2one 2 retrogenes
Callithrix jacchus ENSCJAG00000000132 ortholog_one2one 12 retrogenes
Cavia porcellus ENSCPOG00000020139 possible_ortholog 2 retrogenes
Dasypus novemcinctus ENSDNOG00000013166 ortholog_one2one 8 retrogenes
Felis catus ENSFCAG00000006320 ortholog_one2one 3 retrogenes
Homo sapiens ENSG00000116251 ortholog_one2one 16 retrogenes
Gorilla gorilla ENSGGOG00000027739 possible_ortholog 10 retrogenes
Loxodonta africana ENSLAFG00000006352 ortholog_one2one 5 retrogenes
Macropus eugenii ENSMEUG00000008801 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000018347 possible_ortholog 12 retrogenes
Monodelphis domestica ENSMODG00000006225 possible_ortholog 1 retrogene
Mustela putorius furo ENSMPUG00000007087 ortholog_one2many 6 retrogenes
Mus musculus ENSMUSG00000028936 ortholog_one2one 5 retrogenes
Nomascus leucogenys ENSNLEG00000010337 ortholog_one2one 10 retrogenes
Otolemur garnettii ENSOGAG00000014776 ortholog_one2one 7 retrogenes
Pongo abelii ENSPPYG00000001951 ortholog_one2one 11 retrogenes
Pan troglodytes ENSPTRG00000000076 ortholog_one2one 14 retrogenes
Rattus norvegicus ENSRNOG00000011104 ortholog_one2one 5 retrogenes
Sarcophilus harrisii ENSSHAG00000018731 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000003367 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000002832 possible_ortholog 4 retrogenes
Tupaia belangeri ENSTBEG00000009172 ortholog_one2one 33 retrogenes
Tarsius syrichta ENSTSYG00000003649 possible_ortholog 32 retrogenes
Tursiops truncatus ENSTTRG00000010488 ortholog_one2one 8 retrogenes
Vicugna pacos ENSVPAG00000009466 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_369 69.60 93.89
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_amel_830 80.39 77.86
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_amel_870 60.16 91.60
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_amel_1219 75.22 85.50
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_amel_1247 72.64 79.39
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_amel_1775 76.40 67.18
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_amel_1793 62.60 97.71
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSAMEG00000009864 retrocopies