RetrogeneDB ID: | retro_lafr_394 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_143:717668..718239(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSLAFG00000010888 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.04 % |
Parental protein coverage: | 54.08 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 4 |
Parental | HGDVWSWLEFFLTSIFSALWVLP-LFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNL- |
.GDV.SWLEFFLTSIFS.LWVLP.L..LSKVVN.IWFQ.IAD.AFEVSGRKPHPFPSV.K.IADMLFNL. | |
Retrocopy | YGDV*SWLEFFLTSIFSTLWVLP<LLALSKVVNVIWFQNIADQAFEVSGRKPHPFPSVRKAIADMLFNL< |
Parental | LLQALFLLQGM-FVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGL |
L.QALFLLQG..F.SLF.IH.V.QLV.LLHMSLLYSL.CFE...FNKG.EMH..LSN..RNWP.YFGFGL | |
Retrocopy | LPQALFLLQGS<FGSLF-IHPVIQLVCLLHMSLLYSLHCFE*Y*FNKGVEMH*LLSNMQRNWPSYFGFGL |
Parental | PLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAY-LFQLRLFSLVVFLSN |
P.A.LTA.Q.SY.ISGCLFSILFPLFIIS.NEAK.PGK.Y..F.L.LFSLVV.L.. | |
Retrocopy | PFALLTATQFSYLISGCLFSILFPLFIISTNEAKAPGKVY>IFKLSLFSLVVLLTD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |