RetrogeneDB ID: | retro_nleu_853 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397275.1:9062122..9063140(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSNLEG00000007451 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.09 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MADSVKTFLQDLARGIKDSIW-GICTISKLDARIQQKREEQRRRRASSVLAQRRAQSIERKQESEPRIVS |
M.DSVKTFLQ..AR.IKDSIW.GI.TISKLDA.IQQKREEQ..RRA.SVLAQ.RAQ..E.KQESEP.IVS | |
Retrocopy | MTDSVKTFLQNFARRIKDSIW<GIRTISKLDAQIQQKREEQA*RRATSVLAQERAQHVEWKQESEPCIVS |
Parental | RIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIGDPSLHGDVWSWLEFFLTSIFSALWVLPLFVLSK |
RIFQCCAWNGGVF.F.LLLF.RVFIPVLQSVT..IIGDPSLHGDVW.WLEFFL.SIF.ALWVLP.FVLSK | |
Retrocopy | RIFQCCAWNGGVFLFRLLLF*RVFIPVLQSVTVQIIGDPSLHGDVW*WLEFFLRSIFNALWVLPMFVLSK |
Parental | VVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMS |
VVN...FQDIADL..EVSGRKPHPFPSVSKIIADMLFN.LLQALFLIQGM.V.LF.IHLV.QLVSL.HMS | |
Retrocopy | VVNVT*FQDIADLTIEVSGRKPHPFPSVSKIIADMLFNPLLQALFLIQGMLVILFLIHLVSQLVSLFHMS |
Parental | LLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANE |
LLYSL.CFEYRWFNKGIE.HQ.LSNIE.NWPYY.GFG.PLAFL.AM.SSYIISGCLFSILFPLF.IS.NE | |
Retrocopy | LLYSLHCFEYRWFNKGIEIHQQLSNIESNWPYYCGFGFPLAFLIAMLSSYIISGCLFSILFPLFVISTNE |
Parental | AKTPGKAYLFQLR-LFSLVVFLSNRLFHKTVYLQSALSSSTSAEKFPSPHPSPAKLKAAAGH |
AKTPGK.YLFQL..LFSLVVFLSNRLFHKTVYLQSALSSSTSAEKFP.PHPS.AKLKAAA.H | |
Retrocopy | AKTPGKVYLFQLS<LFSLVVFLSNRLFHKTVYLQSALSSSTSAEKFPLPHPSLAKLKAAASH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |