RetrogeneDB ID: | retro_lafr_398 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_143:261810..262376(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSLAFG00000010888 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.76 % |
Parental protein coverage: | 53.52 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | DVWSWLEFFLTSIFSALWVLP-LFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLL- |
.V.SWLEFFLTSIFSALWVLP.LFVLSK.VN.IWFQ.IAD.AFEV.GRKP.PFPSV.K.IADMLFNL.L. | |
Retrocopy | NV*SWLEFFLTSIFSALWVLP<LFVLSKCVNVIWFQSIADQAFEVTGRKPRPFPSVRKAIADMLFNLCL< |
Parental | QALFLLQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLA |
QALFLLQG.F.SLF.IH.VGQLV.LLHMSLLYSL.CFE...FNKGIEMH..LSNI.RNWP.YFGFGLPLA | |
Retrocopy | QALFLLQGKFGSLF-IHPVGQLVCLLHMSLLYSLHCFE*Y*FNKGIEMH*LLSNIQRNWPSYFGFGLPLA |
Parental | FLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAY-LFQLRLFSLVVFLSN |
.LTA.Q.S.I.SGCLFSILFPLFIIS.NEAK.PGK.Y..F.L.LFSLVV.L.. | |
Retrocopy | LLTATQFSFITSGCLFSILFPLFIISINEAKDPGKVY>VFKLSLFSLVVLLTD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |