RetrogeneDB ID: | retro_tsyr_1423 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_434812:51..849(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSTSYG00000004747 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 92.86 % |
Parental protein coverage: | 74.51 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQSIERKQESEPRIVSRIFQCCAWNGGVFW |
.GIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQS.ERKQESEPRIVSRIFQCC..NGGVFW | |
Retrocopy | QGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQSMERKQESEPRIVSRIFQCCTQNGGVFW |
Parental | FSLLLFYRVFIPVLQSVTARIIGDPSLHGDVWSWLEFLLTSIFSALWVLPLFVLSKVVNAIWFQDIADLA |
FSLLLFYRVF.PVLQSVTA.IIGDPSLH.DVW..LEFLLTSIFSALWVLPLFVLSKVVNAIWFQ.I..LA | |
Retrocopy | FSLLLFYRVFLPVLQSVTA*IIGDPSLHEDVWW*LEFLLTSIFSALWVLPLFVLSKVVNAIWFQGIEGLA |
Parental | FEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFN |
FEVSGRKPHPFP.V.KIIADMLFNLLLQ.LFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFN | |
Retrocopy | FEVSGRKPHPFPTVTKIIADMLFNLLLQTLFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFN |
Parental | KGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANE |
KGIEMHQ.LSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILF.LFII.AN. | |
Retrocopy | KGIEMHQQLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFLLFIIIAND |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |