RetrogeneDB ID: | retro_tsyr_1238 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_35986:6214..6853(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSTSYG00000004747 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 58.99 % |
Parental protein coverage: | 59.66 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | GDVWSWLEFLLTSIFSALWV-LPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLL |
GDVW..LEF.LT...S.LWV...LFVLSK.V.AIW.Q..AD.A.E.SG.K..P.....K.IA.M.F.L.L | |
Retrocopy | GDVWPLLEFSLTFVLSVLWV<ALLFVLSKIVQAIWLQPMADPASEASGKKTYPCSRFGKVIAHMSFDLFL |
Parental | QALFLIQGMF-VSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYF-GFGLP |
..L....G...VS....HL.GQL.SLLH.SL.YS........FNKGI..HQ.LSNIERNWPYYF..FG.P | |
Retrocopy | MLLTSPSGCV*VSRLSKHLDGQLISLLHVSLIYSFHGL**LRFNKGIGRHQQLSNIERNWPYYF<SFGSP |
Parental | LAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKAYLFQLRLFS-LVVFLSNRLFHKTVYLQSALSS |
LAF..AMQSS.I.S.CLF.I.FPLF..S..EAKTP.KA..FQL.LFS.L.VFLSNRL.H..V.....L.S | |
Retrocopy | LAFCRAMQSSNIVSDCLFFICFPLFVLSIREAKTPDKACFFQLPLFS<LGVFLSNRLCHTMVSVLFSLLS |
Parental | STSAEKF |
S.SAEKF | |
Retrocopy | SISAEKF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |