RetrogeneDB ID: | retro_lafr_566 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_2126:2311..2869(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSLAFG00000010888 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.63 % |
Parental protein coverage: | 52.68 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | SWLEFFLTSIFSALWVLP-LFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNL-LLQAL |
SWLEFFLTSIFSALWVLP.LFVLSKVVN.IWFQ.IAD.AFEVSGRKPHPFPSV.K.IADM.FNL.L.QAL | |
Retrocopy | SWLEFFLTSIFSALWVLP<LFVLSKVVNVIWFQNIADQAFEVSGRKPHPFPSVRKAIADMPFNL<LPQAL |
Parental | FLLQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAF-L |
FLLQG.F.SLF.IH.VGQLV.LLHMSLLYSL.CFE...FNKGIEMH..LSNIERNWP.YFGFGLPL.F.L | |
Retrocopy | FLLQGKFGSLF-IHPVGQLVCLLHMSLLYSLHCFE*Y*FNKGIEMH*LLSNIERNWPSYFGFGLPLSF>L |
Parental | TAMQSSYIISGCLFSILFPLFIISANEAKTPGKAY-LFQLRLFSLVVFLSN |
TA.Q.S.I.SGCLFSILFPLFIIS.NEAK.PGK.Y..F.L.LFSLVV.L.. | |
Retrocopy | TATQFSFITSGCLFSILFPLFIISINEAKDPGKVY>VFKLSLFSLVVLLTD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |