RetrogeneDB ID: | retro_ogar_659 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873525.1:28090152..28091022(+) | ||
Located in intron of: | ENSOGAG00000016899 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EI24 | ||
Ensembl ID: | ENSOGAG00000001838 | ||
Aliases: | None | ||
Description: | etoposide induced 2.4 [Source:HGNC Symbol;Acc:13276] |
Percent Identity: | 59.67 % |
Parental protein coverage: | 86.18 % |
Number of stop codons detected: | 9 |
Number of frameshifts detected | 7 |
Parental | MADSVKTFLQDLARGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQSTERKQESEPRIVSR |
M.DSV..FL..LARGIKD..W..CT.SKLDA.IQ..R.E...R.AS.VL..............EP..VS. | |
Retrocopy | MVDSVEIFLHNLARGIKDLTWDTCTMSKLDAQIQRQRDE*C*R-ASCVLXXXXXXXXXXXXXTEPLTVS* |
Parental | IFQCC-AWNGGVFWCSLLLFYRMFIPGLQYVTALIIGDPSLHGVFWSWLEFFLTSIFSALWVL-PLFV-L |
IFQCC.A.NG.VFW...LLFY..FI..L..VT..IIG.P..HG..WS...FFLT.I.SA.WVL.PLFV.L | |
Retrocopy | IFQCC>ARNGVVFWFNFLLFYQVFILVL*SVTIQIIGGPPQHGGVWS*MKFFLTLISSAFWVL<PLFV<L |
Parental | SKVVNAIWFQDIADLAFEVSGRRPHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPI-HLVGQLVSLL |
SK.VNAIW..DIADLAFEV.G...H...S..K.........LLQALFL.QG.FVS.FP..HLV..LVS.. | |
Retrocopy | SKTVNAIWS*DIADLAFEVPGSLIHSLRS-AK*WLTCCSTFLLQALFLLQGGFVSFFPA<HLVSELVSYV |
Parental | HMSLLYSLYCFEYRWFNKGIEM-HQRLSNIERNWPYY-FGFGLPLAFLTAMQSSYIISGCLFSILFPLFI |
.M..LYS.Y.F...WFNK..EM.HQ.LS..ERNWPYY..GFGLPLAFLTA..SSYIISGCLFS.L.PLFI | |
Retrocopy | CMAFLYSPYGFQ*PWFNKETEM>HQGLSDMERNWPYY<LGFGLPLAFLTAVPSSYIISGCLFSSL*PLFI |
Parental | ISANEAKTPGK-AYLFQLRL |
.S..EAKT.....YLFQLRL | |
Retrocopy | VSTSEAKTLSE<VYLFQLRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |