Parental gene: | ACTG1, ENSG00000184009 |
| Aliases: | ACTG1, ACT, ACTG, BRWS2, DFNA20, DFNA26, HEL-176 |
| Description: | actin, gamma 1 [Source:HGNC Symbol;Acc:144] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:79476996..79490873(-) |
>ENSG00000184009
ATGGAAGAAGAGATCGCCGCGCTGGTCATTGACAATGGCTCCGGCATGTGCAAAGCTGGTTTTGCTGGGGACGACGCTCC
CCGAGCCGTGTTTCCTTCCATCGTCGGGCGCCCCAGACACCAGGGCGTCATGGTGGGCATGGGCCAGAAGGACTCCTACG
TGGGCGACGAGGCCCAGAGCAAGCGTGGCATCCTGACCCTGAAGTACCCCATTGAGCATGGCATCGTCACCAACTGGGAC
GACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGCGTGGCCCCGGAGGAGCACCCAGTGCTGCTGACCGA
GGCCCCCCTGAACCCCAAGGCCAACAGAGAGAAGATGACTCAGATTATGTTTGAGACCTTCAACACCCCGGCCATGTACG
TGGCCATCCAGGCCGTGCTGTCCCTCTACGCCTCTGGGCGCACCACTGGCATTGTCATGGACTCTGGAGACGGGGTCACC
CACACGGTGCCCATCTACGAGGGCTACGCCCTCCCCCACGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACCGA
CTACCTCATGAAGATCCTCACTGAGCGAGGCTACAGCTTCACCACCACGGCCGAGCGGGAAATCGTGCGCGACATCAAGG
AGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAGGAGATGGCCACCGCCGCATCCTCCTCTTCTCTGGAGAAGAGCTAC
GAGCTGCCCGATGGCCAGGTCATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT
GGGTATGGAATCTTGCGGCATCCACGAGACCACCTTCAACTCCATCATGAAGTGTGACGTGGACATCCGCAAAGACCTGT
ACGCCAACACGGTGCTGTCGGGCGGCACCACCATGTACCCGGGCATTGCCGACAGGATGCAGAAGGAGATCACCGCCCTG
GCGCCCAGCACCATGAAGATCAAGATCATCGCACCCCCAGAGCGCAAGTACTCGGTGTGGATCGGTGGCTCCATCCTGGC
CTCACTGTCCACCTTCCAGCAGATGTGGATTAGCAAGCAGGAGTACGACGAGTCGGGCCCCTCCATCGTCCACCGCAAAT
GCTTCTAA
ATGGAAGAAGAGATCGCCGCGCTGGTCATTGACAATGGCTCCGGCATGTGCAAAGCTGGTTTTGCTGGGGACGACGCTCC
CCGAGCCGTGTTTCCTTCCATCGTCGGGCGCCCCAGACACCAGGGCGTCATGGTGGGCATGGGCCAGAAGGACTCCTACG
TGGGCGACGAGGCCCAGAGCAAGCGTGGCATCCTGACCCTGAAGTACCCCATTGAGCATGGCATCGTCACCAACTGGGAC
GACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGCGTGGCCCCGGAGGAGCACCCAGTGCTGCTGACCGA
GGCCCCCCTGAACCCCAAGGCCAACAGAGAGAAGATGACTCAGATTATGTTTGAGACCTTCAACACCCCGGCCATGTACG
TGGCCATCCAGGCCGTGCTGTCCCTCTACGCCTCTGGGCGCACCACTGGCATTGTCATGGACTCTGGAGACGGGGTCACC
CACACGGTGCCCATCTACGAGGGCTACGCCCTCCCCCACGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACCGA
CTACCTCATGAAGATCCTCACTGAGCGAGGCTACAGCTTCACCACCACGGCCGAGCGGGAAATCGTGCGCGACATCAAGG
AGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAGGAGATGGCCACCGCCGCATCCTCCTCTTCTCTGGAGAAGAGCTAC
GAGCTGCCCGATGGCCAGGTCATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT
GGGTATGGAATCTTGCGGCATCCACGAGACCACCTTCAACTCCATCATGAAGTGTGACGTGGACATCCGCAAAGACCTGT
ACGCCAACACGGTGCTGTCGGGCGGCACCACCATGTACCCGGGCATTGCCGACAGGATGCAGAAGGAGATCACCGCCCTG
GCGCCCAGCACCATGAAGATCAAGATCATCGCACCCCCAGAGCGCAAGTACTCGGTGTGGATCGGTGGCTCCATCCTGGC
CTCACTGTCCACCTTCCAGCAGATGTGGATTAGCAAGCAGGAGTACGACGAGTCGGGCCCCTCCATCGTCCACCGCAAAT
GCTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 755 .38 RPM |
| bodymap2_lung | 2935 .37 RPM |
| bodymap2_breast | 980 .46 RPM |
| bodymap2_adipose | 1801 .72 RPM |
| bodymap2_adrenal | 1297 .48 RPM |
| bodymap2_skeletal_muscle | 354 .63 RPM |
| bodymap2_thyroid | 1262 .62 RPM |
| bodymap2_prostate | 1597 .02 RPM |
| bodymap2_colon | 1470 .98 RPM |
| bodymap2_testis | 1156 .51 RPM |
| bodymap2_brain | 718 .46 RPM |
| bodymap2_heart | 195 .06 RPM |
| bodymap2_white_blood_cells | 2004 .26 RPM |
| bodymap2_lymph_node | 1199 .50 RPM |
| bodymap2_ovary | 2319 .78 RPM |
| bodymap2_kidney | 891 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000015238 | ortholog_one2one | 3 retrogenes | |
| Ailuropoda melanoleuca | ENSAMEG00000016015 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002885 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000012101 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000018600 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000026434 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000075624 | within_species_paralog | 6 retrogenes | |
| Homo sapiens | ENSG00000138107 | other_paralog | 1 retrogene | |
| Gallus gallus | ENSGALG00000028749 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014043 | ortholog_one2one | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000009167 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002647 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011610 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000062825 | ortholog_one2one | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015506 | possible_ortholog | 3 retrogenes | |
| Petromyzon marinus | ENSPMAG00000004161 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008735 | ortholog_one2one | 11 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000002102 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000036701 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000028355 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006868 | possible_ortholog | 2 retrogenes | |
| Xenopus tropicalis | ENSXETG00000025116 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_409 | 80.79 | 86.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1548 | 75.12 | 53.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1607 | 66.79 | 71.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2405 | 77.49 | 50.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_2591 | 87.79 | 56.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_2605 | 82.79 | 81.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_3466 | 84.08 | 99.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_3631 | 85.55 | 93.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_4818 | 81.36 | 62.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_4935 | 84.80 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000184009 retrocopies