Parental gene:

RPL23, ENSGGOG00000025082

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:45321709..45325433(+)


>ENSGGOG00000025082
ATGTCGAAGCGAGGACGTGGTGGGTCCTCTGGTGCGAAATTCCGGATTTCCTTGGGTCTTCCGGTAGGAGCTGTAATCAA
TTGTGCTGACAACACAGGAGCCAAAAACCTGTATATCATCTCCGTGAAGGGGATCAAGGGACGGCTGAACAGACTTCCCG
CTGCTGGTGTGGGTGACATGGTGATGGCCACAGTCAAGAAAGGCAAACCAGAGCTCAGAAAAAAGGTACATCCAGCAGTG
GTCATTCGACAACGAAAGTCATACCGTAGAAAAGATGGCGTGTTTCTTTATTTTGAAGATAATGCAGGAGTCATAGTGAA
CAATAAAGGCGAGATGAAAGGTTCTGCCATTACAGGACCAGTAGCAAAGGAGTGTGCAGACTTGTGGCCCCGGATTGCAT
CCAATGCTGGCAGCATTGCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 88 .67 RPM
SRP007412_cerebellum 83 .41 RPM
SRP007412_heart 74 .11 RPM
SRP007412_kidney 374 .17 RPM
SRP007412_liver 246 .11 RPM
SRP007412_testis 176 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004268 possible_ortholog 6 retrogenes
retro_amel_1791, retro_amel_226, retro_amel_308, retro_amel_880, retro_amel_918, retro_amel_990,
Callithrix jacchus ENSCJAG00000008311 possible_ortholog 9 retrogenes
retro_cjac_1129, retro_cjac_1483, retro_cjac_2283, retro_cjac_2598, retro_cjac_2639, retro_cjac_2772, retro_cjac_2885, retro_cjac_3128, retro_cjac_3831,
Latimeria chalumnae ENSLACG00000004430 ortholog_many2many 1 retrogene
retro_lcha_16,
Macaca mulatta ENSMMUG00000004502 ortholog_one2one 9 retrogenes
retro_mmul_1598, retro_mmul_1705, retro_mmul_1955, retro_mmul_2366, retro_mmul_2391, retro_mmul_384, retro_mmul_928, retro_mmul_930, retro_mmul_935,
Monodelphis domestica ENSMODG00000012634 ortholog_one2one 3 retrogenes
retro_mdom_1949, retro_mdom_527, retro_mdom_916,
Mustela putorius furo ENSMPUG00000015075 ortholog_one2one 2 retrogenes
retro_mputfur_1138, retro_mputfur_1324,
Nomascus leucogenys ENSNLEG00000000642 ortholog_one2one 7 retrogenes
retro_nleu_1506, retro_nleu_181, retro_nleu_2056, retro_nleu_2337, retro_nleu_2988, retro_nleu_574, retro_nleu_8,
Oryctolagus cuniculus ENSOCUG00000013915 possible_ortholog 6 retrogenes
retro_ocun_1027, retro_ocun_1196, retro_ocun_1270, retro_ocun_1919, retro_ocun_251, retro_ocun_482,
Otolemur garnettii ENSOGAG00000012445 possible_ortholog 7 retrogenes
retro_ogar_1050, retro_ogar_1645, retro_ogar_1695, retro_ogar_2250, retro_ogar_277, retro_ogar_3145, retro_ogar_539,
Ochotona princeps ENSOPRG00000001957 possible_ortholog 10 retrogenes
retro_opri_1079, retro_opri_1216, retro_opri_137, retro_opri_14, retro_opri_178, retro_opri_202, retro_opri_224, retro_opri_481, retro_opri_639, retro_opri_684,
Pteropus vampyrus ENSPVAG00000002277 possible_ortholog 2 retrogenes
retro_pvam_488, retro_pvam_890,
Rattus norvegicus ENSRNOG00000004107 ortholog_one2one 10 retrogenes
retro_rnor_1195, retro_rnor_1539, retro_rnor_1622, retro_rnor_2445, retro_rnor_2483, retro_rnor_2688, retro_rnor_2981, retro_rnor_347, retro_rnor_498, retro_rnor_941,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_256 65.73 100.00
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2. retro_ggor_504 60.99 98.57
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3. retro_ggor_1574 77.30 100.00
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4. retro_ggor_1744 70.45 62.14
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5. retro_ggor_1746 79.56 97.86
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6. retro_ggor_2416 89.36 100.00
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7. retro_ggor_2508 79.72 100.00
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8. retro_ggor_2710 76.80 88.57
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9. retro_ggor_2757 53.40 72.14
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Download FASTA sequences of all ENSGGOG00000025082 retrocopies