Parental gene:

RPL23, ENSPVAG00000002277

Aliases:None
Description:ribosomal protein L23 [Source:HGNC Symbol;Acc:10316]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_3313:134674..138493(-)


>ENSPVAG00000002277
ATGTCGAAGCGAGGACGTGGTGGGTCCTCTGGTGCGAAATTCCGGATTTCTCTGGGCCTTCCGGTAGGAGCCGTAATCAA
CTGTGCCGACAATACAGGAGCCAAAAATTTGTATATTATCTCTGTGAAGGGGATAAAGGGAAGACTGAACAGACTTCCTG
CTGCTGGTGTGGGTGACATGGTGATGGCCACAGTCAAGAAGGGCAAACCAGAGCTCAGAAAGAAAGTACATCCAGCGGTG
GTAATTCGACAACGAAAGTCATACCGGAGAAAAGATGGCGTGTTTCTTTATTTTGAAGATAACGCAGGGGTCATCGTAAA
CAATAAAGGCGAAATGAAAGGTTCTGCCATCACAGGACCAGTTGCAAAGGAGTGTGCAGATTTGTGGCCCAGGATTGCAT
CCAATGCTGGCAGCATTGCATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004268 possible_ortholog 6 retrogenes
retro_amel_1791, retro_amel_226, retro_amel_308, retro_amel_880, retro_amel_918, retro_amel_990,
Bos taurus ENSBTAG00000003229 possible_ortholog 5 retrogenes
retro_btau_1588, retro_btau_349, retro_btau_65, retro_btau_953, retro_btau_974,
Callithrix jacchus ENSCJAG00000008311 possible_ortholog 9 retrogenes
retro_cjac_1129, retro_cjac_1483, retro_cjac_2283, retro_cjac_2598, retro_cjac_2639, retro_cjac_2772, retro_cjac_2885, retro_cjac_3128, retro_cjac_3831,
Gorilla gorilla ENSGGOG00000025082 possible_ortholog 9 retrogenes
retro_ggor_1574, retro_ggor_1744, retro_ggor_1746, retro_ggor_2416, retro_ggor_2508, retro_ggor_256, retro_ggor_2710, retro_ggor_2757, retro_ggor_504,
Latimeria chalumnae ENSLACG00000004430 ortholog_one2many 1 retrogene
retro_lcha_16,
Myotis lucifugus ENSMLUG00000015673 possible_ortholog 9 retrogenes
retro_mluc_1262, retro_mluc_1523, retro_mluc_1598, retro_mluc_1792, retro_mluc_184, retro_mluc_2051, retro_mluc_2410, retro_mluc_447, retro_mluc_560,
Macaca mulatta ENSMMUG00000004502 possible_ortholog 9 retrogenes
retro_mmul_1598, retro_mmul_1705, retro_mmul_1955, retro_mmul_2366, retro_mmul_2391, retro_mmul_384, retro_mmul_928, retro_mmul_930, retro_mmul_935,
Nomascus leucogenys ENSNLEG00000000642 possible_ortholog 7 retrogenes
retro_nleu_1506, retro_nleu_181, retro_nleu_2056, retro_nleu_2337, retro_nleu_2988, retro_nleu_574, retro_nleu_8,
Oryctolagus cuniculus ENSOCUG00000013915 possible_ortholog 6 retrogenes
retro_ocun_1027, retro_ocun_1196, retro_ocun_1270, retro_ocun_1919, retro_ocun_251, retro_ocun_482,
Otolemur garnettii ENSOGAG00000012445 possible_ortholog 7 retrogenes
retro_ogar_1050, retro_ogar_1645, retro_ogar_1695, retro_ogar_2250, retro_ogar_277, retro_ogar_3145, retro_ogar_539,
Ochotona princeps ENSOPRG00000001957 ortholog_one2one 10 retrogenes
retro_opri_1079, retro_opri_1216, retro_opri_137, retro_opri_14, retro_opri_178, retro_opri_202, retro_opri_224, retro_opri_481, retro_opri_639, retro_opri_684,
Rattus norvegicus ENSRNOG00000004107 possible_ortholog 10 retrogenes
retro_rnor_1195, retro_rnor_1539, retro_rnor_1622, retro_rnor_2445, retro_rnor_2483, retro_rnor_2688, retro_rnor_2981, retro_rnor_347, retro_rnor_498, retro_rnor_941,
Ictidomys tridecemlineatus ENSSTOG00000014279 possible_ortholog 2 retrogenes
retro_itri_122, retro_itri_1577,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_488 93.57 100.00
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2. retro_pvam_890 82.61 98.57
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Download FASTA sequences of all ENSPVAG00000002277 retrocopies