RetrogeneDB ID: | retro_amel_990 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192802.1:303739..304134(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23 | ||
Ensembl ID: | ENSAMEG00000004268 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.07 % |
Parental protein coverage: | 95.71 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKV |
GGSS..KF.ISLGL.VGA.INCADNTGAK.L.IISVKG.KG.LNR.PAAGVGDMV.AT.KKGK.ELRKKV | |
Retrocopy | GGSSSTKFQISLGLLVGATINCADNTGAKYLCIISVKGFKGQLNRFPAAGVGDMVKATAKKGKLELRKKV |
Parental | HPAVVIRQRKSYRRK-DGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA |
.PAVVIR..KSY..K.DGVFLY......VI.NNKGEMK...I.GPVAKE.ADL.P.I.SNA.SIA | |
Retrocopy | RPAVVIRHWKSYWKK<DGVFLYLKIMV-VIANNKGEMK-DFIIGPVAKEYADL*PTIVSNADSIA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |