RetrogeneDB ID: | retro_amel_308 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192379.1:2050889..2051291(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23 | ||
Ensembl ID: | ENSAMEG00000004268 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.67 % |
Parental protein coverage: | 97.14 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVK-GIKGRLNRLPAAGVGDMVMATVKKGK |
M.K.G.G.SSG.KF.ISLGLPVGAVI.CAD.TG..NL..IS...G..G.LN.LPAA..GDMVMATVKKGK | |
Retrocopy | MWK*GHGRSSGVKFWISLGLPVGAVIICADSTGVRNL*MISAR<GHQG-LNKLPAASGGDMVMATVKKGK |
Parental | PELRKKVHPA-VVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNA |
PELRKKVHPA.V....R...R...G.FL.FEDN.GV.VN...EMKG.AITGP.A.E.A.LWPRIA..A | |
Retrocopy | PELRKKVHPA>VTGQPRSYQRKA-GMFLCFEDNSGVTVNSPREMKGAAITGPAANEHAHLWPRIAATA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |