RetrogeneDB ID: | retro_itri_526 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393298.1:2984065..2984407(-) | ||
Located in intron of: | ENSSTOG00000000420 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSSTOG00000002719 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 93.86 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN |
MS.IQNLHSF.PFADASKGDDLLPAG.EDYIHIRIQ.RN.RKTLTTVQGIA.DYDKKKLVKAFKKKFACN | |
Retrocopy | MSPIQNLHSFNPFADASKGDDLLPAGSEDYIHIRIQ*RNSRKTLTTVQGIAADYDKKKLVKAFKKKFACN |
Parental | GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLK-VHGF |
GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLK.VHGF | |
Retrocopy | GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKKVHGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |