RetrogeneDB ID: | retro_ogar_1349 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873543.1:6317415..6317753(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSOGAG00000031577 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 84.21 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSAIQNLHSFDPFADASK-GDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC |
.SAIQNLHSFDPFADA...GD.LLPAGT.DYIHIRIQ..NGRKTLTT.QGI..DYDKK.LVK.FKKKFA. | |
Retrocopy | VSAIQNLHSFDPFADACR<GDYLLPAGTQDYIHIRIQ*GNGRKTLTTIQGITNDYDKKQLVKVFKKKFAY |
Parental | NGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF |
NGTVIE.PEYGEVIQLQGDQ.KNICQFLVE.GLAKD.QLKVHGF | |
Retrocopy | NGTVIEYPEYGEVIQLQGDQHKNICQFLVETGLAKDNQLKVHGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |