RetrogeneDB ID: | retro_dord_753 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_766:133607..133840(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Eif1 | ||
Ensembl ID: | ENSDORG00000013853 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125] |
Percent Identity: | 84.81 % |
Parental protein coverage: | 77.23 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | RIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVE-IGL |
RIQ.RN.RKTLTT.QGI.DDYDKKKLVK.FKKKFACNGT.I.HPEYGEVIQLQG.Q.KNICQFLVE..G. | |
Retrocopy | RIQ*RNDRKTLTTDQGITDDYDKKKLVKVFKKKFACNGTIIKHPEYGEVIQLQGEQHKNICQFLVE<VGQ |
Parental | AKDDQLKVH |
AKDDQLKVH | |
Retrocopy | AKDDQLKVH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |