RetrogeneDB ID: | retro_pvam_665 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_608:336147..336479(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSPVAG00000010629 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 79.82 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNG-RKTLTTVQGIADDYDKKKLVKAFKKKFAC |
MSA.QNLHSF.PFADAS.GD.LLPAGTE.YIH.RIQQRN..R.TLTTVQGIADD..KKKL.KAFKKKFA. | |
Retrocopy | MSATQNLHSFNPFADASNGDALLPAGTEEYIHVRIQQRNA<RPTLTTVQGIADD--KKKLIKAFKKKFA* |
Parental | NGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF |
...VIEHPEY..VIQLQGDQ.KNI.QFLVEIGLAKD.QL.V.GF | |
Retrocopy | SDSVIEHPEYRKVIQLQGDQWKNIRQFLVEIGLAKDNQLQVDGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |