RetrogeneDB ID: | retro_amel_823 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192664.1:1175471..1175708(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSAMEG00000005620 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 83.75 % |
Parental protein coverage: | 69.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAK |
IQ.RNGRKTLTTVQGI.DD.DKKKLVKAF..KFACNGTVIEHPEYGEVIQL.GD...NICQFLVE.GLAK | |
Retrocopy | IQHRNGRKTLTTVQGILDDHDKKKLVKAFN-KFACNGTVIEHPEYGEVIQL*GDH*QNICQFLVETGLAK |
Parental | DD-QLKVHGF |
D..QLK.HGF | |
Retrocopy | DEGQLKAHGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |