RetrogeneDB ID: | retro_ogar_856 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873529.1:3583865..3584171(-) | ||
Located in intron of: | ENSOGAG00000016999 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSOGAG00000031577 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 71.15 % |
Parental protein coverage: | 89.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PFADASKGDDLLPAGTEDYIHIRI-QQRNGRKTLTTVQ-GIADDYDKKKLVKAFKKKFACNGTVI-EHPE |
P.ADASKGDDLLPAG.EDYIHIRI.Q........T..Q..IADDYDKKKL.K.FK..F.CNGTVI..HPE | |
Retrocopy | P*ADASKGDDLLPAGAEDYIHIRIQQRNRRKTLITNHQ<MIADDYDKKKLAKVFKMTFVCNGTVI>QHPE |
Parental | YGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHG |
..EVIQLQGD..KNI.QFL.E.GLAKD.QLKVHG | |
Retrocopy | HREVIQLQGDRHKNISQFLTETGLAKDNQLKVHG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |