RetrogeneDB ID: | retro_amel_567 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192505.1:1695830..1696162(+) | ||
Located in intron of: | ENSAMEG00000015657 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSAMEG00000005620 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 84.82 % |
Parental protein coverage: | 98.23 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN- |
SA.QNLHSF.PFADAS.GDD.LPAGTEDYIH.R.QQRNGRKTLTT.QGIADDY.KKKLVK.FKKKFAC.. | |
Retrocopy | SAFQNLHSFEPFADASEGDDPLPAGTEDYIHVRVQQRNGRKTLTTAQGIADDYNKKKLVKVFKKKFACS< |
Parental | GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHG |
.TV.EH.EYGEVIQLQGDQRK.ICQFLVE.GLAKD.QLKVHG | |
Retrocopy | CTVTEHLEYGEVIQLQGDQRKTICQFLVETGLAKDYQLKVHG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |