RetrogeneDB ID: | retro_tbel_2949 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_124928:5320..5756(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHB | ||
Ensembl ID: | ENSTBEG00000010537 | ||
Aliases: | None | ||
Description: | prohibitin [Source:HGNC Symbol;Acc:8912] |
Percent Identity: | 72.97 % |
Parental protein coverage: | 53.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | FESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRN |
.ESIGK.GLA...AGGV.NSAL.NVDAGHRA..FD.FRGVQ.IVV.EGTHFLIPW.QKP...DCRSRPR. | |
Retrocopy | WESIGKVGLASDAAGGVGNSALCNVDAGHRAIVFDQFRGVQGIVVREGTHFLIPWLQKPVFLDCRSRPRI |
Parental | VPVITGSKDLQNVNITLRIL-FRPVASQLPRIFTSIGEDYDERVL-PSITTEILKSVVARFDAGELITQR |
VPVITGSK..QNVN.T.RIL.F..V....P.IF.SIGED.DERVL..SIT.EI.KS.VA.F.AGELI.QR | |
Retrocopy | VPVITGSKGSQNVNLTPRIL<FWLVPASFPGIFRSIGEDCDERVL<ASITSEIPKSAVAPFRAGELIPQR |
Parental | ELVSRQVS |
ELVSRQ.S | |
Retrocopy | ELVSRQAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |