RetrogeneDB ID: | retro_meug_708 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold165599:610..1306(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHB | ||
Ensembl ID: | ENSMEUG00000005122 | ||
Aliases: | None | ||
Description: | prohibitin [Source:HGNC Symbol;Acc:8912] |
Percent Identity: | 90.09 % |
Parental protein coverage: | 85.24 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MAAKLFEAVGKFGLGLAVVGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCR |
M.AKLFEAVGKFGLGL.VVGGVVNSALYNVDAGHRA.IFDRF.GVQDIVVGEGTHFLIPWVQKPIIFDC. | |
Retrocopy | MTAKLFEAVGKFGLGLVVVGGVVNSALYNVDAGHRAAIFDRFHGVQDIVVGEGTHFLIPWVQKPIIFDCH |
Parental | SRPRNVPVITGSKDLQNVNITLRILR-PVANQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELI |
S.P.NVPVIT..KDLQNVNITLRI...PVANQLP.IFTSIGE.Y.ER.LPSITTEILKSVVA.FDAGELI | |
Retrocopy | SQPQNVPVITSNKDLQNVNITLRIFF*PVANQLP*IFTSIGEGYSERLLPSITTEILKSVVAQFDAGELI |
Parental | TQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA |
TQREL.SRQVSDDLTERA.TFGLILDDVSLTHL.FGKEF.EAVEAKQVA.QEAERARFVVEKAEQQKKAA | |
Retrocopy | TQRELISRQVSDDLTERATTFGLILDDVSLTHLIFGKEFMEAVEAKQVA*QEAERARFVVEKAEQQKKAA |
Parental | IISAEGDSKAAELIANSLATAG |
IISAEGDSKAAELIANSL.TAG | |
Retrocopy | IISAEGDSKAAELIANSLPTAG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |