RetrogeneDB - Parental gene ENSOGAG00000001773 details

							
>ENSOGAG00000001773
ATGGCTAAAGGTGACCCCAAGAAACCAAAGGGCAAGATGTCTGCCTATGCCTTCTTTGTGCAGACATGCAGAGAAGAACA

TAAGAAGAAAAACCCAGAGGTCCCTGTAAATTTTGCAGAATTTTCCAAGAAGTGCTCTGAAAGGTGGAAGGCAATGTCTG

GGAAAGAGAAGTCTAAATTTGATGAAATGGCAAAGGCTGATAAAGTCCGCTATGATCGGGAAATGAAGGATTATGGACCG

GCTAAAGGAGGAAAGAAGAAGAAGGACCCTAATGCCCCCAAGAGGCCACCGTCTGGATTTTTCCTTTTCTGTTCAGAATT

CCGCCCCAAGATCAAGTCTACAAATCCTGGTATCTCTGTTGGAGATGTGGCAAAAAAGCTGGGTGAGATGTGGAATAACT

TAAGTGACAGTGAAAAGCAGCCTTACATCACTAAGGCAGCCAAGCTGAAGGAGAAGTATGAGAAGGATGTCGCTGACTAT

AAGTCTAAAGGAAAGTTTGATGGTGCAAAGGGTCCCACTAAAGTTGCCAGGAAAAAGGTGGAAGAGGAAGATGAAGAAGA

TGAAGAGGAGGAGGAGGCAAAGCGGCAAGCGGAAGAGCCA

Species	Parental gene accession	Homology type	Retrogenes number
Bos taurus	ENSBTAG00000005150	ortholog_many2many	2 retrogenes	retro_btau_190, retro_btau_38,
Canis familiaris	ENSCAFG00000028715	possible_ortholog	1 retrogene	retro_cfam_1537,
Choloepus hoffmanni	ENSCHOG00000005005	ortholog_one2many	2 retrogenes	retro_chof_1891, retro_chof_2010,
Callithrix jacchus	ENSCJAG00000003936	ortholog_many2many	9 retrogenes	retro_cjac_1596, retro_cjac_1950, retro_cjac_2343, retro_cjac_2469, retro_cjac_2470, retro_cjac_2738, retro_cjac_2900, retro_cjac_688, retro_cjac_965,
Dipodomys ordii	ENSDORG00000010826	ortholog_one2many	4 retrogenes	retro_dord_214, retro_dord_337, retro_dord_454, retro_dord_609,
Equus caballus	ENSECAG00000020596	possible_ortholog	1 retrogene	retro_ecab_890,
Echinops telfairi	ENSETEG00000015689	possible_ortholog	4 retrogenes	retro_etel_104, retro_etel_1272, retro_etel_385, retro_etel_465,
Felis catus	ENSFCAG00000024624	possible_ortholog	4 retrogenes	retro_fcat_1480, retro_fcat_1504, retro_fcat_265, retro_fcat_865,
Homo sapiens	ENSG00000029993	ortholog_one2many	8 retrogenes	retro_hsap_1461, retro_hsap_1873, retro_hsap_2621, retro_hsap_3064, retro_hsap_3683, retro_hsap_4251, retro_hsap_4904, retro_hsap_627,
Gorilla gorilla	ENSGGOG00000027164	ortholog_one2many	16 retrogenes	retro_ggor_1371, retro_ggor_1538, retro_ggor_1540, retro_ggor_1651, retro_ggor_1834, retro_ggor_2104, retro_ggor_2250, retro_ggor_2469, retro_ggor_2490, retro_ggor_2580, retro_ggor_272, retro_ggor_2944, retro_ggor_301, retro_ggor_414, retro_ggor_549, retro_ggor_618,
Loxodonta africana	ENSLAFG00000025877	possible_ortholog	1 retrogene	retro_lafr_893,
Myotis lucifugus	ENSMLUG00000010926	possible_ortholog	4 retrogenes	retro_mluc_1055, retro_mluc_1989, retro_mluc_215, retro_mluc_529,
Macaca mulatta	ENSMMUG00000004633	ortholog_one2many	20 retrogenes	retro_mmul_1003, retro_mmul_1115, retro_mmul_1143, retro_mmul_1303, retro_mmul_1341, retro_mmul_1482, retro_mmul_1568, retro_mmul_1624, retro_mmul_1799, retro_mmul_1957, retro_mmul_2106, retro_mmul_2425, retro_mmul_2451, retro_mmul_2469, retro_mmul_2484, retro_mmul_2526, retro_mmul_267, retro_mmul_399, retro_mmul_514, retro_mmul_597,
Monodelphis domestica	ENSMODG00000005735	ortholog_one2many	7 retrogenes	retro_mdom_1257, retro_mdom_1508, retro_mdom_1883, retro_mdom_1952, retro_mdom_587, retro_mdom_698, retro_mdom_831,
Mustela putorius furo	ENSMPUG00000011606	ortholog_many2many	2 retrogenes	retro_mputfur_138, retro_mputfur_26,
Mus musculus	ENSMUSG00000015217	ortholog_many2many	1 retrogene	retro_mmus_273,
Oryctolagus cuniculus	ENSOCUG00000005986	possible_ortholog	7 retrogenes	retro_ocun_1033, retro_ocun_1913, retro_ocun_1914, retro_ocun_534, retro_ocun_568, retro_ocun_891, retro_ocun_931,
Otolemur garnettii	ENSOGAG00000003205	other_paralog	104 retrogenes	retro_ogar_1008, retro_ogar_1043, retro_ogar_106, retro_ogar_1133, retro_ogar_123, retro_ogar_1232, retro_ogar_1296, retro_ogar_1299, retro_ogar_1330, retro_ogar_1386, retro_ogar_1398, retro_ogar_1399, retro_ogar_1421, retro_ogar_1423, retro_ogar_1424, retro_ogar_1431, retro_ogar_1461, retro_ogar_1560, retro_ogar_1571, retro_ogar_1585, retro_ogar_1597, retro_ogar_1600, retro_ogar_1607, retro_ogar_1628, retro_ogar_163, retro_ogar_1664, retro_ogar_1698, retro_ogar_17, retro_ogar_172, retro_ogar_1738, retro_ogar_1758, retro_ogar_1781, retro_ogar_1843, retro_ogar_1844, retro_ogar_1861, retro_ogar_1867, retro_ogar_1878, retro_ogar_1894, retro_ogar_1896, retro_ogar_198, retro_ogar_1991, retro_ogar_2136, retro_ogar_2165, retro_ogar_219, retro_ogar_2282, retro_ogar_2318, retro_ogar_2319, retro_ogar_2352, retro_ogar_2385, retro_ogar_2403, retro_ogar_2429, retro_ogar_2436, retro_ogar_2458, retro_ogar_250, retro_ogar_2559, retro_ogar_2598, retro_ogar_2615, retro_ogar_2618, retro_ogar_2730, retro_ogar_2777, retro_ogar_2778, retro_ogar_2814, retro_ogar_2824, retro_ogar_2836, retro_ogar_284, retro_ogar_2845, retro_ogar_2891, retro_ogar_2894, retro_ogar_2906, retro_ogar_2961, retro_ogar_3008, retro_ogar_3018, retro_ogar_3028, retro_ogar_304, retro_ogar_311, retro_ogar_3136, retro_ogar_317, retro_ogar_320, retro_ogar_3208, retro_ogar_3230, retro_ogar_3325, retro_ogar_3330, retro_ogar_3355, retro_ogar_3374, retro_ogar_3500, retro_ogar_422, retro_ogar_435, retro_ogar_511, retro_ogar_542, retro_ogar_547, retro_ogar_634, retro_ogar_663, retro_ogar_698, retro_ogar_716, retro_ogar_772, retro_ogar_778, retro_ogar_8, retro_ogar_835, retro_ogar_890, retro_ogar_904, retro_ogar_912, retro_ogar_918, retro_ogar_92, retro_ogar_933,
Otolemur garnettii	ENSOGAG00000017149	within_species_paralog	3 retrogenes	retro_ogar_3117, retro_ogar_3323, retro_ogar_3336,
Otolemur garnettii	ENSOGAG00000032147	other_paralog	1 retrogene	retro_ogar_1712,
Procavia capensis	ENSPCAG00000001945	possible_ortholog	1 retrogene	retro_pcap_328,
Pongo abelii	ENSPPYG00000020818	ortholog_one2many	22 retrogenes	retro_pabe_1207, retro_pabe_1411, retro_pabe_1505, retro_pabe_1580, retro_pabe_1823, retro_pabe_1825, retro_pabe_1927, retro_pabe_2339, retro_pabe_2538, retro_pabe_2712, retro_pabe_2816, retro_pabe_3000, retro_pabe_3041, retro_pabe_3144, retro_pabe_3387, retro_pabe_3685, retro_pabe_3813, retro_pabe_410, retro_pabe_442, retro_pabe_560, retro_pabe_632, retro_pabe_784,
Pan troglodytes	ENSPTRG00000022371	ortholog_one2many	22 retrogenes	retro_ptro_1115, retro_ptro_1211, retro_ptro_1276, retro_ptro_1429, retro_ptro_1432, retro_ptro_1561, retro_ptro_174, retro_ptro_1766, retro_ptro_2066, retro_ptro_213, retro_ptro_2218, retro_ptro_2296, retro_ptro_2477, retro_ptro_2497, retro_ptro_2608, retro_ptro_2891, retro_ptro_2944, retro_ptro_3154, retro_ptro_3271, retro_ptro_456, retro_ptro_522, retro_ptro_629,
Pteropus vampyrus	ENSPVAG00000000219	ortholog_one2many	1 retrogene	retro_pvam_356,
Rattus norvegicus	ENSRNOG00000011096	ortholog_many2many	4 retrogenes	retro_rnor_1049, retro_rnor_2303, retro_rnor_2359, retro_rnor_2363,
Rattus norvegicus	ENSRNOG00000050910	ortholog_many2many	5 retrogenes	retro_rnor_1956, retro_rnor_2516, retro_rnor_2625, retro_rnor_720, retro_rnor_954,
Sarcophilus harrisii	ENSSHAG00000002916	ortholog_one2many	2 retrogenes	retro_shar_139, retro_shar_316,
Sus scrofa	ENSSSCG00000012745	ortholog_many2many	3 retrogenes	retro_sscr_1094, retro_sscr_466, retro_sscr_467,
Ictidomys tridecemlineatus	ENSSTOG00000023908	ortholog_many2many	6 retrogenes	retro_itri_1366, retro_itri_1527, retro_itri_1655, retro_itri_1749, retro_itri_777, retro_itri_909,
Tupaia belangeri	ENSTBEG00000003068	ortholog_one2many	18 retrogenes	retro_tbel_1002, retro_tbel_1230, retro_tbel_1579, retro_tbel_1700, retro_tbel_1819, retro_tbel_2543, retro_tbel_2730, retro_tbel_3261, retro_tbel_3476, retro_tbel_3623, retro_tbel_3781, retro_tbel_408, retro_tbel_410, retro_tbel_4203, retro_tbel_4209, retro_tbel_4299, retro_tbel_605, retro_tbel_698,
Tursiops truncatus	ENSTTRG00000000205	ortholog_one2many	2 retrogenes	retro_ttru_1187, retro_ttru_372,
Vicugna pacos	ENSVPAG00000000096	ortholog_one2many	2 retrogenes	retro_vpac_245, retro_vpac_434,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_ogar_65	87.01	88.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_ogar_187	92.19	96.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_ogar_204	91.10	95.50	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_ogar_343	88.06	66.50	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_ogar_1318	87.50	88.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_ogar_1647	72.93	88.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_ogar_1728	90.06	80.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_ogar_1930	60.27	70.50	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_ogar_2076	78.61	85.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_ogar_2530	81.54	96.00	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_ogar_2591	91.67	89.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_ogar_2678	94.92	88.00	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_ogar_2743	72.51	83.50	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_ogar_2983	91.28	96.00	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_ogar_3127	75.41	89.50	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_ogar_3371	75.27	90.00	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_ogar_3433	80.77	89.50	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_ogar_3479	78.57	96.00	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_ogar_3513	75.46	80.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSOGAG00000001773 retrocopies

Parental gene:	ENSOGAG00000001773
Aliases:	None
Description:	None
Organism:	*Bushbaby (Otolemur garnettii)*
Coordinates:	GL873709.1:1910186..1912715(-)

Parental gene:

ENSOGAG00000001773