Parental gene: | NANOG, ENSCHOG00000000972 |
| Aliases: | None |
| Description: | Nanog homeobox [Source:HGNC Symbol;Acc:20857] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_14792:5054..10053(+) |
>ENSCHOG00000000972
ATGAGCGTGGATCTAGCTTCTACCCAAAGCCTTCCTTGCCCTGAAACAGACAATTCTCGTGAGTCTTCACCAATGCCGGA
GATTTATGAGGCTGAAAAAAACTATGCATCCTTGCAAATGTCGTCTGCTGAGGTGCACCAGCCAGAGACAGTCTCTCCTC
TTCCTTCCTCTGTGGATCTGCTTATTCAGGATAGCCCCGACTCTTCCACCAGTCCCAAAGTAAAACTACCCATGTCTGGA
GGGAAGAGCGCAGGGAGGAAGGAAGATGAGGGCCAGGTGAAGAAACAGAAGATCAGAACCGTGTTCTCTCAGACCCAGCT
GTGTATACTCAATGATAGATTTCAAAAACAGAAATACCTCAGTCTCCAGCAGATGCAAGAACTTTCCAACATTCTGAACC
TCAGCTACAAACAGGTTAAGACCTGGTTCCAGAACCAGAGAATGAAATGTAAGAAGTGGCAGAAAAACACCAACTGGTCA
AAGAATGGCAACAGTGTGATCCAGAAGGGCTCAGCACCTACAGAATTCCCAGGACTCTACTCTTCCTATCCCCAAGGTTG
CTTGGCGAACACTTCCGGTAACTTCCCCATGTGGAGCAATCAGACCTGGAACAGTCCAATTTGGAGCAGCCATTCCTGGA
GCAGCCAGCACTGGTACACCCAAGCCTGGAATAATAACCCAGTCTGGAACAATCAGTTCCAGAACAGTGGAGAGGAATCC
CTGCAGCTCCAGGTCCAATTCCAGCAAAATTCTCCTGCCAGTGATTTGGAGGCCACCTTGGGAAGTGCTGGGGAAAACCA
TAATGTAATAGAGCAAGCTGCTAAATATTTTAGTACCCTACACACCATGGATTTATTCCCAAATTACTTCATGAATACCC
AGCCTGAA
ATGAGCGTGGATCTAGCTTCTACCCAAAGCCTTCCTTGCCCTGAAACAGACAATTCTCGTGAGTCTTCACCAATGCCGGA
GATTTATGAGGCTGAAAAAAACTATGCATCCTTGCAAATGTCGTCTGCTGAGGTGCACCAGCCAGAGACAGTCTCTCCTC
TTCCTTCCTCTGTGGATCTGCTTATTCAGGATAGCCCCGACTCTTCCACCAGTCCCAAAGTAAAACTACCCATGTCTGGA
GGGAAGAGCGCAGGGAGGAAGGAAGATGAGGGCCAGGTGAAGAAACAGAAGATCAGAACCGTGTTCTCTCAGACCCAGCT
GTGTATACTCAATGATAGATTTCAAAAACAGAAATACCTCAGTCTCCAGCAGATGCAAGAACTTTCCAACATTCTGAACC
TCAGCTACAAACAGGTTAAGACCTGGTTCCAGAACCAGAGAATGAAATGTAAGAAGTGGCAGAAAAACACCAACTGGTCA
AAGAATGGCAACAGTGTGATCCAGAAGGGCTCAGCACCTACAGAATTCCCAGGACTCTACTCTTCCTATCCCCAAGGTTG
CTTGGCGAACACTTCCGGTAACTTCCCCATGTGGAGCAATCAGACCTGGAACAGTCCAATTTGGAGCAGCCATTCCTGGA
GCAGCCAGCACTGGTACACCCAAGCCTGGAATAATAACCCAGTCTGGAACAATCAGTTCCAGAACAGTGGAGAGGAATCC
CTGCAGCTCCAGGTCCAATTCCAGCAAAATTCTCCTGCCAGTGATTTGGAGGCCACCTTGGGAAGTGCTGGGGAAAACCA
TAATGTAATAGAGCAAGCTGCTAAATATTTTAGTACCCTACACACCATGGATTTATTCCCAAATTACTTCATGAATACCC
AGCCTGAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017064 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000013914 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018999 | ortholog_one2one | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000002621 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004648 | ortholog_one2many | 8 retrogenes | |
| Felis catus | ENSFCAG00000001621 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000111704 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028196 | ortholog_one2many | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000009949 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000002228 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000029325 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000030580 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000032158 | ortholog_one2many | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000017979 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000016731 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005359 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000013783 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000026339 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000015460 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004233 | ortholog_one2many | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000029807 | ortholog_one2one | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006989 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_264 | 98.31 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_794 | 99.24 | 88.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_987 | 94.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1267 | 86.05 | 99.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000000972 retrocopies