RetrogeneDB ID: | retro_ogar_568 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873523.1:22860422..22860790(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NANOG | ||
Ensembl ID: | ENSOGAG00000026339 | ||
Aliases: | None | ||
Description: | Nanog homeobox [Source:HGNC Symbol;Acc:20857] |
Percent Identity: | 75.81 % |
Parental protein coverage: | 53.02 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | DLLAQDSPDSSTSPKVKQPTSVEKSVVKKEGKVQVKKQKTRTVFSTTQLCILNDRFQRQKYLSLQQMQEL |
DLL.Q.SP.SSTSPKV...TSVEKS.VKKE.KVQVKKQKTRTVFS.T.LCIL.DRFQRQK.LSL.QMQEL | |
Retrocopy | DLLTQGSPASSTSPKVELSTSVEKSAVKKEDKVQVKKQKTRTVFSLT*LCILRDRFQRQKCLSL*QMQEL |
Parental | SNILNLSYKQVKTWFQNQRMKSKRWQKNNWLKNTNSMTQACL-MNTSGNLPVWS |
SN..NLS..QVKTWFQNQRMKSK.WQKNNWLKNT.SM..A....N.S..L.VW. | |
Retrocopy | SNVRNLSSRQVKTWFQNQRMKSKGWQKNNWLKNTKSMSPAQA<LNASSQLKVWN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |