RetrogeneDB ID: | retro_mputfur_1553 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897239.1:786222..786699(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NANOG | ||
Ensembl ID: | ENSMPUG00000016731 | ||
Aliases: | None | ||
Description: | Nanog homeobox [Source:HGNC Symbol;Acc:20857] |
Percent Identity: | 60.25 % |
Parental protein coverage: | 51.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | ERTGRREDTAQGKKQKIRTVFSQTQ-LYVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKC |
E.T...EDT.Q.KKQK.RT.FS.....Y...D...R......QQMQELSN.LN..YKQVKTWFQNQRMKC | |
Retrocopy | ESTVKKEDTVQSKKQKTRTIFSRSSYMYLVTDL--RDRNTCFQQMQELSNFLNFCYKQVKTWFQNQRMKC |
Parental | KRWQKNHWPKESKSVTQNSTAATEYPAFYSYHQGHLMNTSANLPIWSSQTWNNPNWSNQTWNSQSWSNHS |
KR.Q.N.WP..SKSVTQNS.A..EY...Y.Y.QG.LMN...NLP.WSSQTW.NP.WSN.TW.SQSWSN.S | |
Retrocopy | KRQQENNWPMNSKSVTQNSSATIEYLGLYAYSQGFLMNAFGNLPTWSSQTWYNPHWSN*TWKSQSWSNCS |
Parental | WNGQSWSNHSWTSQTWCPQAW |
WN.Q......W..Q.W..Q.W | |
Retrocopy | WNSQTRWPQAWNNQAWNNQLW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |