RetrogeneDB ID: | retro_etel_1434 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_264970:1503..1933(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.36 % |
Parental protein coverage: | 51.97 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | ASAETDAARKESKGPGK-KQKVRTVFSQTQLCILKDHFQKQKY-LSLQQMQELSEVLNLSYKQVKTWFQN |
.S........E.K.PG..KQ.....F.QTQLC.LK...QKQ.....L..MQELS.VLN.SYKQVK.W.Q. | |
Retrocopy | SSTQVPLPGSEEKCPGR<KQRA*AGFFQTQLCTLKGQSQKQYF>ALLLKMQELSGVLNRSYKQVKPWLQD |
Parental | QRMKCKRWQKTTNWSKNNHAVTQKVSAPTE-YLDVCASYHQGCL-PSGNLPMWSNQSWNSQAWNNQSWNS |
QR.K.KR...T.NWSK..H.VT..VSAPT...L...ASYHQGCL.PSG..PM.S.QSW.SQ...NQ.W.. | |
Retrocopy | QRRKWKRGHTTANWSKTHHRVT-RVSAPTD<SLGLGASYHQGCL<PSGSFPMGSDQSWSSQTRENQRWTG |
Parental | QAWNNQSWN |
QA..NQ..N | |
Retrocopy | QAGSNQFQN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |