RetrogeneDB ID: | retro_mputfur_691 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896935.1:3365022..3365697(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NANOG | ||
Ensembl ID: | ENSMPUG00000016731 | ||
Aliases: | None | ||
Description: | Nanog homeobox [Source:HGNC Symbol;Acc:20857] |
Percent Identity: | 63.79 % |
Parental protein coverage: | 73.87 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MSADPAPPQCRSGPRPPGSRDSSPMPEVCRHEENYAFLQMSSAETPHAETVSPLPSSVDLLV-QDSPDSS |
MS..PA..QC..G.R...SRDS.P.PE....EE.YA.LQMSSAETP..ET.SPL.SS.DLL..QDSPDSS | |
Retrocopy | MSVGPAQLQCPPGLRASNSRDSCPVPEIYGPEEHYASLQMSSAETPYMETISPLSSSMDLLF<QDSPDSS |
Parental | TSPKVKLPPTSAEERTGRREDTAQ-GKKQKIRTVFSQTQLYVLNDRFQRQKYLSLQQMQELSNILNLSYK |
TSP.VKL..TS.EE.T...EDT.Q..KKQKIRT...QTQL.VL..RF..QKYLSL.QMQE.SNILNL.Y. | |
Retrocopy | TSPRVKLRSTSVEESTVKKEDTDQ<VKKQKIRTALPQTQLHVLSERFHGQKYLSLLQMQEHSNILNLNYN |
Parental | QVKTWFQNQRMKCKRWQKNHWPKESKSVTQNSTAATEYPAFYSYHQGHLMNTSANLPIW-SSQTWNNPNW |
QVKTWFQNQRMKCK......WP..S.SVTQ....ATE.P.F.S.HQ..LMN.S.N.PIW...QTW.NPNW | |
Retrocopy | QVKTWFQNQRMKCK---NSNWPENSNSVTQSNSTATEHPGFSSCHQR*LMNPSGNHPIW<EDQTWYNPNW |
Parental | SNQTWNSQSWSNHSWNGQSWSN |
SN..WNS..W..H.WN.Q.W.N | |
Retrocopy | SNHSWNSETWCPHTWNNQAWNN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |