RetrogeneDB ID: | retro_etel_630 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_105459:9512..9986(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000004648 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.08 % |
Parental protein coverage: | 59.86 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | FQKQKYLSLQQMQELSEVLNLSYKQVKTWFQNQRMKCKRWQKTTNWSKNNHAVTQKVSAPTEYLDVCASY |
FQ.QK...LQQMQ....VL.LSYKQ.K..FQNQR.K.K...KTT.W.KN.H..TQKVSAP..YLD.C.S. | |
Retrocopy | FQTQKGPRLQQMQAHPKVLHLSYKQAKILFQNQRRK*KK--KTTKWPKNDHGGTQKVSAPAGYLDLCVSH |
Parental | HQGCLPSGNLPMWSNQSWNSQAWNNQSWNSQAWNNQSWNSQAWNNQTWNSQAWNNPFQNCGEEFLLPQFQ |
H...LPSG.LPMWS...WN.Q.WN.....SQ.W..Q....QAWN.Q...S..WNN.FQNC.EEFLL..FQ | |
Retrocopy | HPRYLPSGTLPMWS---WNRQTWN----SSQVWKSQTRYTQAWNHQSPDSRPWNNLFQNCREEFLLALFQ |
Parental | QTSLCDLEAVQTLDFFLNESISIQSED |
QTS.CDL.AVQTLDFFL..S.S.QS.D | |
Retrocopy | QTSVCDLDAVQTLDFFLSQSMSVQS*D |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |