RetrogeneDB ID: | retro_mputfur_1140 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897024.1:223269..223854(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NANOG | ||
Ensembl ID: | ENSMPUG00000016731 | ||
Aliases: | None | ||
Description: | Nanog homeobox [Source:HGNC Symbol;Acc:20857] |
Percent Identity: | 89.8 % |
Parental protein coverage: | 63.23 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MSADPAPPQCRSGPRPPGSRDSSPMPEVCRHEENYAFLQMSSAETPHAETVSPLPSSVDLLVQDSPDSST |
MS.DP..PQC..GPRPPGSRDSSPM.EVCR.EENY.FLQMSSA.T.H.E.VSPLPSS.DLLVQDSPDSST | |
Retrocopy | MSEDPTLPQCLPGPRPPGSRDSSPMLEVCRPEENYTFLQMSSAKTLHMESVSPLPSSMDLLVQDSPDSST |
Parental | SPKVKLPPTSAEERTGRREDTAQGKKQKIRTVFSQTQLYVLNDRFQRQKYLSLQQMQELSNILNLSYKQV |
SPK.KLPPTSA.ER.GR.EDTAQGKKQ.IRTVF.QTQLYVLNDRFQRQK.LSLQQMQELSNILNLSYKQV | |
Retrocopy | SPKMKLPPTSAKERMGRNEDTAQGKKQ-IRTVFFQTQLYVLNDRFQRQK*LSLQQMQELSNILNLSYKQV |
Parental | KTWFQNQRMKCKRWQKNHWPKESKSVTQNSTAATEYPAFYSYHQGHLMNTSANLPI |
KTWFQNQRMKCKRWQKNHWPKESKSVTQNSTAATEYPAFYSYHQGHLMNTSANLPI | |
Retrocopy | KTWFQNQRMKCKRWQKNHWPKESKSVTQNSTAATEYPAFYSYHQGHLMNTSANLPI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |