RetrogeneDB ID: | retro_ogar_2056 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873585.1:9346140..9346554(-) | ||
Located in intron of: | ENSOGAG00000009360 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSOGAG00000005658 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 84.06 % |
Parental protein coverage: | 66.35 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | EDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGL |
EDNTWEP.E.LD.P.LIAEFLQ.Q.TAHET..SEGGKRKADSDSED.GE.SKPKKKKEESE.PRGFARGL | |
Retrocopy | EDNTWEPGEDLDRPGLIAEFLQWQETAHETGESEGGKRKADSDSED*GEDSKPKKKKEESEEPRGFARGL |
Parental | EPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDDKN |
EPE...GA.DSSGELMFLMK..NSDEADL.PA.EANVKCPQ.V.SFYEERLTWHSYPSEDDDK.DDKN | |
Retrocopy | EPEPSTGAADSSGELMFLMKGENSDEADLGPAEEANVKCPQGVTSFYEERLTWHSYPSEDDDKEDDKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |