RetrogeneDB ID: | retro_ogar_368 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873520.1:6726842..6727188(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSOGAG00000005658 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 62.18 % |
Parental protein coverage: | 56.25 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | IAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELM |
..EFLQSQK.A.ET.K.EGG..KA.SDSEDKGEE.K..KK.EE.E.P..FA.GLE.E...GA.DS..ELM | |
Retrocopy | VTEFLQSQKMADETCKLEGGRSKAASDSEDKGEENK-AKKNEELEEP*AFAWGLEGEWANGAMDSRVELM |
Parental | FLMKWKNSDEADLVPAKEANVKCP-QVVISFYEERLTW-HSYPSEDDDK |
F.MKW.NSD.ADLV.........P.Q.V.SFYEERL.W..SYP.E.DDK | |
Retrocopy | FEMKWGNSDGADLVSQCPHQYQAP<QFVLSFYEERLLW<ASYPLEGDDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |