RetrogeneDB ID: | retro_pvam_1075 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_26251:2188..2644(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLMO2 | ||
Ensembl ID: | ENSPVAG00000005226 | ||
Aliases: | None | ||
Description: | slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892] |
Percent Identity: | 63.23 % |
Parental protein coverage: | 78.87 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | HIDPSGKLHSHRLLSTEWG-LPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERL |
H.DPSGKL.S.R..STEWG.LPS.VK.LIG.ARTK.YV.E..VV.P.EK.MELKSTNISF.NMVSV.ER. | |
Retrocopy | HTDPSGKLPSYRFFSTEWG>LPSTVKYLIGVARTKAYV*ECAVVNPAEKIMELKSTNISFINMVSVVERQ |
Parental | IYKPHPQDPERTVLTQEAIITVKGVSLSSYLEGLMASTISSNANKGREAMEWVIHKLNAEIEELTASAR- |
........P....LTQE.I.T.K....SSYLEGLMA.T.S...NKG.EAME.VIHKL.A..EELT..AR. | |
Retrocopy | M-QTISSKPRKMILTQEIIMTLK*IHFSSYLEGLMAGTTSLKDNKG*EAME*VIHKLSAKTEELTVLAR< |
Parental | GSIRTPMAAAALVEK |
..IRT..AA.A.VEK | |
Retrocopy | VKIRTAIAAVAFVEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |