RetrogeneDB ID: | retro_pvam_1445 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_8889:22700..22991(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SLMO2 | ||
Ensembl ID: | ENSPVAG00000005226 | ||
Aliases: | None | ||
Description: | slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892] |
Percent Identity: | 66. % |
Parental protein coverage: | 50.52 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | VLDRHIDPSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVD |
.....ID.SGKLHSHRLL.T..GL.SIVKSLIGA..TK..V...SVVDP.EKT..LKST.ISFT.MVSVD | |
Retrocopy | IFNSYIDLSGKLHSHRLLNTKLGLLSIVKSLIGAIKTKM*VR-YSVVDPIEKTVKLKSTSISFTSMVSVD |
Parental | ERLIYKPH-PQDPERTVLTQEAII-TVKGV |
.RLIY......D.E..VLTQEAII..VKGV | |
Retrocopy | GRLIYRIK<AHDSEKIVLTQEAII>PVKGV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |