Parental gene:

RPS26, ENSFCAG00000013977

Aliases:None
Description:ribosomal protein S26 [Source:HGNC Symbol;Acc:10414]
Organism:Cat (Felis catus)
Coordinates:B4:84990731..84993169(+)


>ENSFCAG00000013977
ATGACCAAGAAAAGAAGGAACAATGGTCGTGCCAAAAAAGGCCGCGGCCACGTGCAGCCTATTCGCTGCACCAACTGTGC
CCGTTGCGTCCCCAAGGATAAGGCCATTAAGAAGTTCGTTATCCGGAACATAGTAGAGGCCGCCGCGGTCAGGGACATTT
CTGAAGCGAGTGTCTTCGACGCCTATGTGCTTCCCAAGCTGTATGTGAAACTGCATTACTGTGTGAGTTGTGCCATTCAC
AGCAAGGTAGTCAGGAATCGCTCTCGTGAAGCACGGAAGGACCGAACACCACCACCCAGATTTAGACCTGCCGGTGCTGC
CCCACGACCTCCACCAAAGCCTATGTAA

Library Parental gene expression (RPM)
SRP017611_brain 39 .94 RPM
SRP017611_kidney 119 .55 RPM
SRP017611_liver 78 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038896 possible_ortholog 3 retrogenes
retro_btau_191, retro_btau_25, retro_btau_724,
Cavia porcellus ENSCPOG00000023630 possible_ortholog 6 retrogenes
retro_cpor_115, retro_cpor_1231, retro_cpor_134, retro_cpor_173, retro_cpor_48, retro_cpor_992,
Echinops telfairi ENSETEG00000004510 possible_ortholog 35 retrogenes
retro_etel_1072, retro_etel_1145, retro_etel_1149, retro_etel_1175, retro_etel_1321, retro_etel_1357, retro_etel_1407, retro_etel_1423, retro_etel_1469, retro_etel_1498, retro_etel_155, retro_etel_162, retro_etel_1647, retro_etel_1691, retro_etel_1703, retro_etel_1734, retro_etel_1801, retro_etel_181, retro_etel_1859, retro_etel_1913, retro_etel_1963, retro_etel_2006, retro_etel_2043, retro_etel_2138, retro_etel_2146, retro_etel_2175, retro_etel_269, retro_etel_354, retro_etel_38, retro_etel_424, retro_etel_462, retro_etel_741, retro_etel_77, retro_etel_894, retro_etel_898,
Gorilla gorilla ENSGGOG00000011566 possible_ortholog 6 retrogenes
retro_ggor_106, retro_ggor_121, retro_ggor_19, retro_ggor_55, retro_ggor_56, retro_ggor_63,
Loxodonta africana ENSLAFG00000013329 possible_ortholog 8 retrogenes
retro_lafr_180, retro_lafr_240, retro_lafr_40, retro_lafr_464, retro_lafr_513, retro_lafr_768, retro_lafr_835, retro_lafr_962,
Myotis lucifugus ENSMLUG00000029968 possible_ortholog 10 retrogenes
retro_mluc_1153, retro_mluc_149, retro_mluc_1925, retro_mluc_2065, retro_mluc_2163, retro_mluc_2462, retro_mluc_266, retro_mluc_309, retro_mluc_332, retro_mluc_477,
Macaca mulatta ENSMMUG00000017042 ortholog_one2one 7 retrogenes
retro_mmul_1009, retro_mmul_1017, retro_mmul_1676, retro_mmul_1944, retro_mmul_2092, retro_mmul_294, retro_mmul_646,
Mus musculus ENSMUSG00000025362 ortholog_one2one 1 retrogene
retro_mmus_115,
Pan troglodytes ENSPTRG00000005075 possible_ortholog 1 retrogene
retro_ptro_74,
Sus scrofa ENSSSCG00000000374 possible_ortholog 2 retrogenes
retro_sscr_406, retro_sscr_650,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_428 91.38 100.00
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2. retro_fcat_508 52.33 73.04
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3. retro_fcat_949 60.17 100.00
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4. retro_fcat_1211 63.79 100.00
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5. retro_fcat_1332 63.03 100.00
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6. retro_fcat_1460 81.03 100.00
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7. retro_fcat_1728 63.89 62.61
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8. retro_fcat_1851 86.84 66.09
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9. retro_fcat_1948 76.34 80.87
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10. retro_fcat_1949 78.26 80.00
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Download FASTA sequences of all ENSFCAG00000013977 retrocopies