Parental gene: | ARL2BP, ENSGGOG00000005471 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 16:47140405..47151813(+) |
>ENSGGOG00000005471
ATGGACGCCTTAGAAGGAGAGAGCTTTGCGCTGTCTTTCTCCTCCGCCTCTGATGCAGAATTTGATGCTGTGGTTGGATA
TTTAGAGGACATTATCATGGATGACGAGTTCCAGTTATTACAGAGAAATTTCATGGACAAGTACTACCTGGAGTTTGAAG
ACACAGAAGAGAATAAACTCATCTACACACCTATTTTTAATGAATACATTTCTTTGGTAGAAAAATACATTGAAGAACAG
CTGCTGCAGCGGATTCCTGGGTTCAACATGGCAGCCTTCACCACAACATTACAGCACCATAAGGATGAAGTGGCTGGTGA
CATATTCGACATGCTGCTCACCTTCACAGATTTTCTGGCTTTTAAAGAAATGTTTTTGGACTACAGAGCAGAAAAAGAAG
GCCGAGGACTGGACTTAAGCAGTGGCTTAGTGGTGACTTCATTGTGCAAATCATCTTCTCTGCCAGCTTCCCAGAACAAT
CTGCGGCACTAG
ATGGACGCCTTAGAAGGAGAGAGCTTTGCGCTGTCTTTCTCCTCCGCCTCTGATGCAGAATTTGATGCTGTGGTTGGATA
TTTAGAGGACATTATCATGGATGACGAGTTCCAGTTATTACAGAGAAATTTCATGGACAAGTACTACCTGGAGTTTGAAG
ACACAGAAGAGAATAAACTCATCTACACACCTATTTTTAATGAATACATTTCTTTGGTAGAAAAATACATTGAAGAACAG
CTGCTGCAGCGGATTCCTGGGTTCAACATGGCAGCCTTCACCACAACATTACAGCACCATAAGGATGAAGTGGCTGGTGA
CATATTCGACATGCTGCTCACCTTCACAGATTTTCTGGCTTTTAAAGAAATGTTTTTGGACTACAGAGCAGAAAAAGAAG
GCCGAGGACTGGACTTAAGCAGTGGCTTAGTGGTGACTTCATTGTGCAAATCATCTTCTCTGCCAGCTTCCCAGAACAAT
CTGCGGCACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 49 .49 RPM |
| SRP007412_cerebellum | 39 .60 RPM |
| SRP007412_heart | 8 .72 RPM |
| SRP007412_kidney | 29 .73 RPM |
| SRP007412_liver | 15 .69 RPM |
| SRP007412_testis | 117 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012116 | ortholog_one2many | 9 retrogenes | |
| Cavia porcellus | ENSCPOG00000011406 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000016621 | possible_ortholog | 3 retrogenes | |
| Felis catus | ENSFCAG00000002937 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000102931 | ortholog_one2one | 7 retrogenes | |
| Loxodonta africana | ENSLAFG00000008633 | possible_ortholog | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000012467 | possible_ortholog | 6 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012680 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000020352 | ortholog_one2one | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000013511 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002803 | ortholog_one2one | 7 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000582 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000006931 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007384 | ortholog_one2one | 8 retrogenes | |
| Pan troglodytes | ENSPTRG00000008150 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016991 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005442 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010254 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014441 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004923 | ortholog_one2many | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_927 | 77.78 | 60.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2159 | 74.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2202 | 79.67 | 74.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2222 | 60.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2868 | 73.39 | 75.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000005471 retrocopies