RetrogeneDB ID: | retro_ggor_927 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 13:18716941..18717235(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARL2BP | ||
Ensembl ID: | ENSGGOG00000005471 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.78 % |
Parental protein coverage: | 60.74 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PIFNEYISLVEKYIEEQLLQRIPGFNMAAFTTTLQHHKDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKE |
PIFNEYISL..KYIEEQLL..I.GF.MA.FTT.L.HHKDEV.GDI..MLL.FTDFLAFKEMFLD.RAEKE | |
Retrocopy | PIFNEYISLAGKYIEEQLLEQILGFTMATFTT-L*HHKDEVLGDILQMLLKFTDFLAFKEMFLDCRAEKE |
Parental | GRGLDLSSGLVVTSLCKSSSLPASQNNLR |
...LDLS.GLV.TSLCKSSS..ASQNNL. | |
Retrocopy | AQRLDLSHGLVETSLCKSSSMTASQNNLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .00 RPM | 49 .49 RPM |
SRP007412_cerebellum | 0 .00 RPM | 39 .60 RPM |
SRP007412_heart | 0 .00 RPM | 8 .72 RPM |
SRP007412_kidney | 0 .00 RPM | 29 .73 RPM |
SRP007412_liver | 0 .00 RPM | 15 .69 RPM |
SRP007412_testis | 0 .00 RPM | 117 .38 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_1189 |
Pan troglodytes | retro_ptro_816 |
Pongo abelii | retro_pabe_990 |