RetrogeneDB ID: | retro_amel_1708 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194039.1:354631..354974(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSAMEG00000011083 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 70.59 % |
Parental protein coverage: | 88.46 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | MVRMNVLADALKSINNAEKR-GKRQVLI-RPCSKVIVRFLTVMMKHGYIG-EFEIIDDHRAGKIVVNLTG |
MV.MNVLA..L.SIN.A..R.G....L..RP.SKVI..FLTV.MKHGYIG...EIIDD.RA.K..VNLTG | |
Retrocopy | MVHMNVLAEGLESINKAKER<GNTRFLL<RPSSKVITQFLTVTMKHGYIG<QLEIIDDYRAEKTIVNLTG |
Parental | RLNKCGVISPRVDVQL-KDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEE |
RLNKCGV.S.R.DV.L.KDLEK.QNNLLPSRQFGFI.LT..AGIMDH.E | |
Retrocopy | RLNKCGVMSLRSDVHL>KDLEK*QNNLLPSRQFGFIILTP*AGIMDHDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |