Parental gene:

Rps15a, ENSDORG00000001557

Aliases:None
Description:ribosomal protein S15A [Source:MGI Symbol;Acc:MGI:2389091]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_2895:915..3721(-)


>ENSDORG00000001557
ATGGTGCGCATGAACGTCCTGGCTGACGCCCTCAAGAGCATCAACAATGCTGAGAAGAGAGGCAAACGCCAGGTGCTCAT
CAGGCCGTGCTCCAAAGTCATCGTCAGGTTCCTCATTGTGATGATGAAGCATGGCTACATTGGCGAGTTTGAAATCATTG
ATGATCACAGAGCTGGGAAAATTGTTGTGAACCTCACAGGCAGATTAAACAAGTGTGGAGTAATCAGCCCCCGATTTGAT
GTGCAGCTCAAAGACCTTGAAAAATGGCAGAATAATCTGCTCCCATCCCGTCAATTTGGCTTCATCGTTCTGACCACCTC
AGCTGGCATCATGGACCATGAAGAAGCAAGACGGAAACACACAGGAGGGAAAATCCTGGGATTCTTTTTCTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011083 ortholog_one2one 18 retrogenes
Bos taurus ENSBTAG00000020733 possible_ortholog 5 retrogenes
Callithrix jacchus ENSCJAG00000020071 ortholog_one2many 6 retrogenes
Cavia porcellus ENSCPOG00000021695 ortholog_one2one 12 retrogenes
Dasypus novemcinctus ENSDNOG00000008341 ortholog_one2one 45 retrogenes
Equus caballus ENSECAG00000019293 ortholog_one2one 2 retrogenes
Homo sapiens ENSG00000134419 ortholog_one2one 37 retrogenes
Gorilla gorilla ENSGGOG00000026299 ortholog_one2one 32 retrogenes
Gadus morhua ENSGMOG00000005862 ortholog_one2many 1 retrogene
Latimeria chalumnae ENSLACG00000011476 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000026996 ortholog_one2one 13 retrogenes
Microcebus murinus ENSMICG00000012241 ortholog_one2one 20 retrogenes
Macaca mulatta ENSMMUG00000005593 ortholog_one2one 3 retrogenes
Oryctolagus cuniculus ENSOCUG00000000179 ortholog_one2one 25 retrogenes
Otolemur garnettii ENSOGAG00000013199 ortholog_one2one 14 retrogenes
Pongo abelii ENSPPYG00000007139 ortholog_one2one 2 retrogenes
Pan troglodytes ENSPTRG00000007823 ortholog_one2one 2 retrogenes
Pteropus vampyrus ENSPVAG00000002901 ortholog_one2one 14 retrogenes
Rattus norvegicus ENSRNOG00000018320 possible_ortholog 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000025222 ortholog_one2one 26 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_51 76.81 52.31
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dord_165 82.44 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_dord_455 77.27 99.23
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_dord_496 51.76 63.85
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_dord_582 58.40 92.31
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSDORG00000001557 retrocopies