RetrogeneDB ID: | retro_amel_766 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192618.1:767381..767771(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000003791 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSAMEG00000011083 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 76.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLN |
.V.MNVLAD.LKSI.NA.KRGK.QVL.RP.SKVIV.FLTVMMKHGYIG.FEI.D.H.A.KIVVNLTGRL. | |
Retrocopy | IVHMNVLADDLKSITNAKKRGKCQVLTRPGSKVIVQFLTVMMKHGYIGQFEITDVHKARKIVVNLTGRLH |
Parental | KCGVISPRVDVQLKDLEKWQNNLLPSRQFG-FIVLTTSAGIMDHEEAR-RKHTGGKILGFFF |
.C.V..PR.DVQLKDLE.W.NNLLPS.QF..FIVLTTSAGI.DHEEAR..K.TG.KI.GFFF | |
Retrocopy | TCEVVRPRSDVQLKDLERWHNNLLPSHQFC<FIVLTTSAGITDHEEAR>KKYTGAKIPGFFF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |