RetrogeneDB ID: | retro_amel_1894 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL195345.1:36254..36616(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSAMEG00000011083 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 80.16 % |
Parental protein coverage: | 93.85 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MVRMNVL-ADALKSINNAEKRGKRQVLIRPCSKVIVRFL-TVMMKHGYIGEFEIIDDHRAGKIVVNLTGR |
MV.MNVL.A...KS.NNAEKR.KRQV.IRPCSKVI..F..TVMMKHGYIGEFEII.DH.AGKIVVNLTGR | |
Retrocopy | MVYMNVL<ASCSKSTNNAEKRSKRQVPIRPCSKVII*FQ<TVMMKHGYIGEFEIINDHKAGKIVVNLTGR |
Parental | LNKCGVIS-PRVDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEE-ARRKHTG |
LN.CGVIS.PR.DVQ.KDLEKWQNNLLPS.QF.FIVL.TSAGI.DHEE.ARRK..G | |
Retrocopy | LNECGVIS<PRFDVQCKDLEKWQNNLLPSLQFVFIVLITSAGIIDHEE<ARRKILG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |