RetrogeneDB ID: | retro_amel_1770 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194266.1:271024..271303(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSAMEG00000011083 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 73.12 % |
Parental protein coverage: | 71.54 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | IVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRVDVQLKDLEKWQNNLLPSRQFGFIV |
I..FLTVMMKH.YIGEFEIIDD..AGKIVVNLT..LNK...I....DVQLKD.E.WQN.L.....FGFIV | |
Retrocopy | IIWFLTVMMKHDYIGEFEIIDDR*AGKIVVNLTDWLNKGVMINT*SDVQLKDIERWQNDLSLFH*FGFIV |
Parental | LTTSAGIMDHEEARRKHTGGKIL |
.TTSAGIMDHEEAR.K.TGGKIL | |
Retrocopy | VTTSAGIMDHEEAR*KQTGGKIL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |