RetrogeneDB ID: | retro_chof_1336 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_267288:1430..1793(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTGES3 | ||
Ensembl ID: | ENSCHOG00000006514 | ||
Aliases: | None | ||
Description: | prostaglandin E synthase 3 (cytosolic) [Source:HGNC Symbol;Acc:16049] |
Percent Identity: | 82.64 % |
Parental protein coverage: | 82.76 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QPASAKWYDRRDYVFIEFCVEDSKDVNVNSEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDR |
QPASAK.Y.RRD..FIEFCVEDSKDVNVNSEKSKLT.SCLGGSD.FKHL.EIDLFH.IDPND.K.K.TDR | |
Retrocopy | QPASAKGYNRRD*IFIEFCVEDSKDVNVNSEKSKLTVSCLGGSDHFKHLKEIDLFHYIDPNDLKNKKTDR |
Parental | SIL-CCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFD |
SIL....RKG.S.QSWP.LTKERAKLNWLS.DFNNWKDWEDDSDED..NFD | |
Retrocopy | SILXXXXRKGDSDQSWPSLTKERAKLNWLSADFNNWKDWEDDSDEDICNFD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |