RetrogeneDB ID: | retro_lafr_490 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_19:46567196..46567665(+) | ||
Located in intron of: | ENSLAFG00000002577 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTGES3 | ||
Ensembl ID: | ENSLAFG00000008268 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QPASAKWYDRRDYVFIEFCVEDSRDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFNCIDPNDSKHKRTDR |
QPASAKWYD.RD..FIEFC..D......NFEK.KLTFSCL.GS.NFKH.NEIDLF..IDPNDSKHK..DR | |
Retrocopy | QPASAKWYDGRDCLFIEFCG*D---IHINFEKFKLTFSCLEGSGNFKHVNEIDLFHWIDPNDSKHKKADR |
Parental | SILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKD-WEDDSDEDMSNFDRFSEMMNNMGGDEDVDLPE |
SILCCLRK.ESGQSWPRLTKERAKL.WL..DF.NWKD..EDDS..DMS...R.SEM.N..GGDED..LPE | |
Retrocopy | SILCCLRKEESGQSWPRLTKERAKLRWLGMDFSNWKD>REDDSHKDMSKSNRISEMVNDKGGDEDAGLPE |
Parental | VDGADDDSQDSDDEKMPDLE |
.DGADDDSQDSDDE..PDLE | |
Retrocopy | TDGADDDSQDSDDENIPDLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |