RetrogeneDB ID: | retro_ogar_2858 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873672.1:1501643..1502119(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTGES3 | ||
Ensembl ID: | ENSOGAG00000028667 | ||
Aliases: | None | ||
Description: | prostaglandin E synthase 3 (cytosolic) [Source:HGNC Symbol;Acc:16049] |
Percent Identity: | 91.88 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QPASAKWYDRRDYVFVEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKR-TD |
QPASAKWYDRRD.VF.EFCVED.KDVNVNFEKSKL.FSCLGGSDNFKHLN.IDLFHCID.NDSKHKR.T. | |
Retrocopy | QPASAKWYDRRDCVFIEFCVEDGKDVNVNFEKSKLPFSCLGGSDNFKHLN*IDLFHCIDANDSKHKR<TA |
Parental | RSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDLPE |
RSILCCLRKGE..QSW.RLTKERA.LNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDE.VDLPE | |
Retrocopy | RSILCCLRKGEYSQSWLRLTKERAELNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEGVDLPE |
Parental | VDGADDDSQDSDDEKMPDLE |
VDGADDDSQDSDDEKMPDLE | |
Retrocopy | VDGADDDSQDSDDEKMPDLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |