RetrogeneDB ID: | retro_dord_94 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_2928:35041..35268(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Ptges3 | ||
Ensembl ID: | ENSDORG00000000964 | ||
Aliases: | None | ||
Description: | prostaglandin E synthase 3 (cytosolic) [Source:MGI Symbol;Acc:MGI:1929282] |
Percent Identity: | 88.31 % |
Parental protein coverage: | 50.67 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | DRSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDL- |
DRS.LCCLRKG.SGQSWPRLTKERAKLNWL.VDF.NWKDWEDDSDEDMSN.D.FSEMMNNMGGDEDVDL. | |
Retrocopy | DRSSLCCLRKG*SGQSWPRLTKERAKLNWLTVDFKNWKDWEDDSDEDMSNCDCFSEMMNNMGGDEDVDL< |
Parental | PEVDGAD |
.E.DGAD | |
Retrocopy | TEEDGAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |