Parental gene: | Ptges3, ENSRNOG00000002642 |
| Aliases: | Ptges3, RGD1561913 |
| Description: | Prostaglandin E synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P83868] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 7:2459081..2476400(+) |
>ENSRNOG00000002642
CAGCCTGCTTCTGCAAAGTGGTACGACCGAAGGGACTATGTATTCATTGAATTTTGTGTTGAAGACAGTAAAGATGTTAA
TGTAAACTTTGAAAAATCCAAACTTACTTTCAGTTGTCTTGGAGGAAGTGATAATTTTAAGCATTTAAATGAAATTGATC
TTTTTCATTGTATTGATCCAAATGATTCCAAGCATAAAAGAACGGACAGATCGATTTTATGTTGTTTGCGAAAAGGAGAA
TCCGGCCAATCCTGGCCTAGGTTAACAAAGAATAGAAATAAGCTTAATTGGCTTAGTGTGGACTTCAATAATTGGAAAGA
TTGGGAGGATGACTCAGATGAAGACATGTCTAATTTTGACCGTTTCTCTGAGATGATGGATCACATGGGTGGTGATGAGG
ATGTAGATTTACCAGAAGTAGACGGAGCAGATGATGATTCACAAGACAGTGATGATGAAAAAATGCCAGATCTGGAGTAA
CAGCCTGCTTCTGCAAAGTGGTACGACCGAAGGGACTATGTATTCATTGAATTTTGTGTTGAAGACAGTAAAGATGTTAA
TGTAAACTTTGAAAAATCCAAACTTACTTTCAGTTGTCTTGGAGGAAGTGATAATTTTAAGCATTTAAATGAAATTGATC
TTTTTCATTGTATTGATCCAAATGATTCCAAGCATAAAAGAACGGACAGATCGATTTTATGTTGTTTGCGAAAAGGAGAA
TCCGGCCAATCCTGGCCTAGGTTAACAAAGAATAGAAATAAGCTTAATTGGCTTAGTGTGGACTTCAATAATTGGAAAGA
TTGGGAGGATGACTCAGATGAAGACATGTCTAATTTTGACCGTTTCTCTGAGATGATGGATCACATGGGTGGTGATGAGG
ATGTAGATTTACCAGAAGTAGACGGAGCAGATGATGATTCACAAGACAGTGATGATGAAAAAATGCCAGATCTGGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 55 .94 RPM |
| SRP017611_kidney | 93 .09 RPM |
| SRP017611_brain | 71 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004172 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000017967 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000006514 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000010724 | ortholog_one2many | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000000057 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011310 | ortholog_one2many | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000000964 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000000024 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000110958 | ortholog_one2many | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027957 | ortholog_many2many | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000008268 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000001288 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015927 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000013766 | ortholog_one2many | 6 retrogenes | |
| Mus musculus | ENSMUSG00000071072 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017454 | ortholog_many2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028667 | ortholog_one2many | 3 retrogenes | |
| Procavia capensis | ENSPCAG00000007779 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004669 | ortholog_many2many | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000005108 | ortholog_one2many | 8 retrogenes | |
| Sorex araneus | ENSSARG00000007751 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002994 | ortholog_one2many | 15 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009622 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_119 | 88.44 | 92.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1011 | 62.69 | 81.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1836 | 88.89 | 78.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1931 | 88.89 | 78.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2895 | 52.08 | 60.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002642 retrocopies