RetrogeneDB ID: | retro_ggor_135 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 1:91525252..91525735(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000024958 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000110958 | ||
Ensembl ID: | ENSGGOG00000027957 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 98.12 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTD |
MQPASAKWYDRR.YVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCID.NDSKHKRTD | |
Retrocopy | MQPASAKWYDRRHYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDTNDSKHKRTD |
Parental | RSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDLPE |
RSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDLPE | |
Retrocopy | RSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDLPE |
Parental | VDGADDDSQDSDDEKMPDLE |
VDGADDDS.DSDDEKMPDLE | |
Retrocopy | VDGADDDSRDSDDEKMPDLE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .14 RPM | 31 .60 RPM |
SRP007412_cerebellum | 0 .08 RPM | 24 .11 RPM |
SRP007412_heart | 0 .03 RPM | 4 .16 RPM |
SRP007412_kidney | 0 .29 RPM | 35 .04 RPM |
SRP007412_liver | 0 .18 RPM | 23 .90 RPM |
SRP007412_testis | 0 .21 RPM | 68 .89 RPM |