RetrogeneDB ID: | retro_chof_388 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_102884:5503..5902(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7L1 | ||
Ensembl ID: | ENSCHOG00000000306 | ||
Aliases: | None | ||
Description: | ribosomal protein L7-like 1 [Source:HGNC Symbol;Acc:21370] |
Percent Identity: | 78.36 % |
Parental protein coverage: | 54.47 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | IKGIGLLMRRTIERLRLRKIFSGVFVKMTPTTLKMLRTVEPYVTWGFPNLKSVRELILKRGQAKVKNKII |
IKGIGLL..RT.ER..L.KIFSGVFVK.TPTTLKML.TVEPYV.WGFPNLKSV...ILK.GQAKVKNKII | |
Retrocopy | IKGIGLLVQRTTERCQL-KIFSGVFVKVTPTTLKMLHTVEPYVIWGFPNLKSVP*IILKCGQAKVKNKII |
Parental | PLTDNTVIEEHLGRFGVICLEDLIHEVAFPGKYFDRISQFLCPFHLSVARHATKNKVGFFKEMG |
PLTDNTV...HLGRFGVIC...L.HE.AFP.KYF.RISQFLC.FHL.V..HATKN.VGF.KEMG | |
Retrocopy | PLTDNTVLQGHLGRFGVIC*K*LSHEIAFPVKYFKRISQFLCSFHLLVVHHATKNQVGFLKEMG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |